James: Created page with "Start up tutorials of the program can be found on following links http://nbviewer.ipython.org/gist/dereneaton/1f661bfb205b644086cc/tutorial_RAD_3.0.ipynb and on: http://nbviewer.ipython.org/gist/dereneaton/af9548ea0e94bff99aa0/pyRAD_v.3.0.ipynb Every user has to prepare the parameter file (in below example params.txt), which will hold parameters of PyRAD run. The full description of content of this file is given into manual (see above). To run PyRAD job first load..."

2022-10-20T20:16:21Z

Created page with "Start up tutorials of the program can be found on following links http://nbviewer.ipython.org/gist/dereneaton/1f661bfb205b644086cc/tutorial_RAD_3.0.ipynb and on: http://nbviewer.ipython.org/gist/dereneaton/af9548ea0e94bff99aa0/pyRAD_v.3.0.ipynb Every user has to prepare the parameter file (in below example params.txt), which will hold parameters of PyRAD run. The full description of content of this file is given into manual (see above). To run PyRAD job first load..."

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Start up tutorials of the program can be found on following links

http://nbviewer.ipython.org/gist/dereneaton/1f661bfb205b644086cc/tutorial_RAD_3.0.ipynb

and on:

http://nbviewer.ipython.org/gist/dereneaton/af9548ea0e94bff99aa0/pyRAD_v.3.0.ipynb

Every user has to prepare the parameter file (in below example params.txt), which will hold parameters of PyRAD run. The full description of content of this file is given
into manual (see above). To run PyRAD job first load module for pyRAD with the command
<pre>
module load pyrad
</pre>

Then submit a job with SLURM script. The simple SLURM script which an be used as template for user's job submission script is as follows:
<pre>
#!/bin/bash
#!/bin/bash
#SBATCH --partition production
#SBATCH --job-name my_job
#SBATCH --nodes=1
#SBATCH --ntasks=1

# change to the working directory
cd $SLURM_SUBMIT_DIR
echo ">>>> Begin my_job"

pyRAD -p params.txt

echo">>>> End of a job"

</pre>

Please check the manual for the command line options (and their meaning) of the pyRAD. .

PyRAD - Revision history