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• 19:59, 20 October 2022 James talk contribs created page CUFFLINKS (Created page with "At the CUNY HPC Center CUFFLINKS is installed on ANDY. CUFFLINKS is a parallel threaded code (pthreads) that takes its input from a simple text file provided on the command line. Below is an example SLURM script that will run the messenger RNA test case provided at the website here [http://cufflinks.cbcb.umd.edu/tutorial.html]. To include all required environmental variables and the path to the CUFFLINKS executable run the modules load command (the modules utility is d...")